algorithm_config.yaml

+algorithm_description: Run AOS Tracking paper plots on DPS
+algorithm_name: aos_maap_dps
+algorithm_version: main
+build_command: aos_maap_dps/build.sh
+disk_space: 20GB
+docker_container_url: mas.maap-project.org/david.m.giles/aos_test/aos_dps:develop
+inputs:
+  config: []
+  file: []
+  positional:
+  - default: ''
+    description: ''
+    name: analysis_date
+    required: false
+queue: maap-dps-sandbox
+repository_url: https://repo.maap-project.org/sshah/aos_maap_dps.git
+run_command: aos_maap_dps/run.sh
\ No newline at end of file

build.sh

+#!/bin/bash
+set -euo pipefail
+
+# Install maap-py so we can use MAAP Secrets in run.sh
+conda run --no-capture-output --name mytobac python -m pip install maap-py

run.sh

+#!/bin/bash
+
+set -euo pipefail
+
+readarray -d " " -t credentials <<<"$(
+    conda run --no-capture-output --name mytobac python -c '
+from maap.maap import MAAP
+maap = MAAP()
+username = maap.secrets.get_secret("EARTHDATA_USERNAME")
+password = maap.secrets.get_secret("EARTHDATA_PASSWORD")
+print(username, password)
+'
+)"
+
+EARTHDATA_USERNAME=$(echo -e "${credentials[0]}" | tr -d '[:space:]')
+EARTHDATA_PASSWORD=$(echo -e "${credentials[1]}" | tr -d '[:space:]')
+export EARTHDATA_USERNAME
+export EARTHDATA_PASSWORD
+
+# All of the scripts below will use AOS_WORKING_DIR as the root output directory.
+AOS_WORKING_DIR="${PWD}/output"
+export AOS_WORKING_DIR
+
+analysis_date=$1
+
+conda run --no-capture-output --name mytobac python /root/aos_test/src/acquire_and_convert_calipso.py "${analysis_date}"
+conda run --no-capture-output --name mytobac python /root/aos_test/src/acquire_goes.py "${analysis_date}"
+conda run --no-capture-output --name mytobac python /root/aos_test/src/process_object_tracking.py "${analysis_date}"