Mexico R Algorithm Registration

Todo list of things to prepare https://repo.maap-project.org/lduncanson/biomass_harmonization/-/tree/master/NASA_CMS_2023/Mexico/DPS_algorithm for registration

build_command.sh

• Remove conda install commands from build
• Change env name to r , drop libmamba (redundant in r:v3.1.5)
• Add a call to an Rscript just for installing INLA, split this from the main R file (should this use conda run?)

options(repos=c(CRAN="https://cloud.r-project.org/"))
install.packages("INLA",repos=c(getOption("repos"),INLA="https://inla.r-inla-download.org/R/stable"), dep=TRUE)

run_GMBpredictions_MEX.yaml

• update docker image to r:v3.1.5

run_GMBpredictions_MEX.sh

• should this wrap Rscript in conda run?

GMB_Mexico.R

• remove the INLA install