From 31a3dfa26d71062d0bc06710dbcfec0cee667e97 Mon Sep 17 00:00:00 2001
From: nehajo88 <nehajo88@gmail.com>
Date: Mon, 19 Aug 2024 19:24:03 -0700
Subject: [PATCH] Classifying the world into IPCC Table 4.7
---
.../FOREST_Classification/env_main_ADE.yaml | 21 +++++++++++--------
.../run_IPCC_classes_ADE.yml | 2 +-
...OTES_data_download_and_preprocessing.ipynb | 4 ++--
3 files changed, 15 insertions(+), 12 deletions(-)
diff --git a/Hunka_2024_NSD/FOREST_Classification/env_main_ADE.yaml b/Hunka_2024_NSD/FOREST_Classification/env_main_ADE.yaml
index fa1a571..75474a8 100644
--- a/Hunka_2024_NSD/FOREST_Classification/env_main_ADE.yaml
+++ b/Hunka_2024_NSD/FOREST_Classification/env_main_ADE.yaml
@@ -1,13 +1,16 @@
-name: Packages_for_IPCC
+name: Packages_for_GMB
channels:
- conda-forge
- defaults
dependencies:
- - pip
- - memory_profiler==0.61.0 # optional
- - pandas>=1.4.1
- - numpy>=1.22.3
- - rasterio>=1.2.10
- - matplotlib>=3.6.2
- - pip:
- - rio-cogeo
\ No newline at end of file
+ - r-fmesher
+ - r-exactextractr
+ - r-sn
+ - r-MatrixModels
+ - r-inlabru
+ - r-terra
+ - r-dplyr
+ - r-spdep
+ - r-sf
+ - r-fields
+ - r-Matrix
\ No newline at end of file
diff --git a/Hunka_2024_NSD/FOREST_Classification/run_IPCC_classes_ADE.yml b/Hunka_2024_NSD/FOREST_Classification/run_IPCC_classes_ADE.yml
index 9deb5df..11b9a64 100644
--- a/Hunka_2024_NSD/FOREST_Classification/run_IPCC_classes_ADE.yml
+++ b/Hunka_2024_NSD/FOREST_Classification/run_IPCC_classes_ADE.yml
@@ -3,7 +3,7 @@ algorithm_name: run_IPCC_classes_ADE
algorithm_version: IPCC_classes_ADE_v7
build_command: biomass_harmonization/country_summaries/IPCC_classes_DPS/build_command_main_ADE.sh
disk_space: 40GB
-docker_container_url: mas.maap-project.org/root/maap-workspaces/base_images/vanilla:v3.1.3
+docker_container_url: mas.maap-project.org/root/maap-workspaces/base_images/python:v4.0.0
inputs:
config: []
file:
diff --git a/Hunka_2024_NSD/NOTES_data_download_and_preprocessing.ipynb b/Hunka_2024_NSD/NOTES_data_download_and_preprocessing.ipynb
index 8aca4fc..2c2fb94 100644
--- a/Hunka_2024_NSD/NOTES_data_download_and_preprocessing.ipynb
+++ b/Hunka_2024_NSD/NOTES_data_download_and_preprocessing.ipynb
@@ -7,7 +7,7 @@
"source": [
"###################################\n",
"\n",
- "The following are notes that provide the steps followed for the download and pre-processing of input datasets (Table 1). The end product are the datasets resampled and aligned to a 30 m x 30 m grid in 10 x 10 degree tiles. These steps are reproducible for batch processing on the AWS DPS cloud-computing system that supports the NASA MAAP. For ease of use, a single 10 x 10 degree tile (00N_000E) is exemplified so the steps are comprehensible and easily implementable on local machines. Cells are executable in either Python or R depending on the opertation to be performed, and it is indicated which to use where. \n",
+ "The following are notes that provide the steps followed for the download and pre-processing of input datasets (Table 1). The end product are the datasets resampled and aligned to an approximately 30 m x 30 m grid in 10 x 10 degree tiles. These steps are reproducible for batch processing on the AWS DPS cloud-computing system that supports the NASA MAAP. For ease of use, a single 10 x 10 degree tile (00N_000E) is exemplified so the steps are comprehensible and easily implementable on local machines. Cells are executable in either Python or R depending on the opertation to be performed, and it is indicated which to use where. \n",
"\n",
"###################################"
]
@@ -41,7 +41,7 @@
"source": [
"### (3) SPATIAL DATABASE OF PLANTED TREES \n",
"\n",
- "#### Download restricted till version 2.0 is officially released (code to be updated when released) \n",
+ "#### Downloaded on https://www.wri.org/research/spatial-database-planted-trees-sdpt-version-2\n",
"#### No pre-processing required"
]
},
--
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