diff --git a/.ipynb_checkpoints/run-checkpoint.sh b/.ipynb_checkpoints/run-checkpoint.sh
index f959a6f1c771c1853776d447ae66042b0680aaf9..047fbb54049c4ec327b937634a0187c682f4a9ef 100644
--- a/.ipynb_checkpoints/run-checkpoint.sh
+++ b/.ipynb_checkpoints/run-checkpoint.sh
@@ -4,7 +4,7 @@
 basedir=$( cd "$(dirname "$0")" ; pwd -P)
 
 # Activate environment that was created in the builed-env.sh file
-# source activate osgeo-env
+source activate osgeo-env
 
 # Create output dir
 # OUTPUTDIR="${PWD}/output"
diff --git a/notebooks/run-gedi-biomass.ipynb b/notebooks/run-gedi-biomass.ipynb
index c05b6954cbb016e017ad309e11e7569519ffe161..aa6f88e2ca0e5ea4bb57e5ec72c99cccb962577c 100644
--- a/notebooks/run-gedi-biomass.ipynb
+++ b/notebooks/run-gedi-biomass.ipynb
@@ -42,7 +42,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 4,
+   "execution_count": null,
    "id": "b0d65f96-5dad-44e9-ae85-9d4086c4b29f",
    "metadata": {},
    "outputs": [],
@@ -50,7 +50,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 3,
+   "execution_count": null,
    "id": "b39e76ac-d765-4b8c-baf1-fe41f3296de9",
    "metadata": {
     "tags": []
@@ -62,17 +62,6 @@
      "text": [
       "on file num:  200\r"
      ]
-    },
-    {
-     "ename": "KeyboardInterrupt",
-     "evalue": "",
-     "output_type": "error",
-     "traceback": [
-      "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
-      "\u001b[0;31mKeyboardInterrupt\u001b[0m                         Traceback (most recent call last)",
-      "Cell \u001b[0;32mIn[3], line 38\u001b[0m\n\u001b[1;32m     36\u001b[0m     \u001b[38;5;28mprint\u001b[39m(\u001b[38;5;124m\"\u001b[39m\u001b[38;5;124mon file num: \u001b[39m\u001b[38;5;124m\"\u001b[39m, counter, end\u001b[38;5;241m=\u001b[39m\u001b[38;5;124m'\u001b[39m\u001b[38;5;130;01m\\r\u001b[39;00m\u001b[38;5;124m'\u001b[39m)\n\u001b[1;32m     37\u001b[0m     \u001b[38;5;66;03m# break\u001b[39;00m\n\u001b[0;32m---> 38\u001b[0m     \u001b[43mtime\u001b[49m\u001b[38;5;241;43m.\u001b[39;49m\u001b[43msleep\u001b[49m\u001b[43m(\u001b[49m\u001b[38;5;241;43m900\u001b[39;49m\u001b[43m)\u001b[49m\n\u001b[1;32m     39\u001b[0m counter\u001b[38;5;241m+\u001b[39m\u001b[38;5;241m=\u001b[39m\u001b[38;5;241m1\u001b[39m\n",
-      "\u001b[0;31mKeyboardInterrupt\u001b[0m: "
-     ]
     }
    ],
    "source": [
diff --git a/run.sh b/run.sh
index f959a6f1c771c1853776d447ae66042b0680aaf9..047fbb54049c4ec327b937634a0187c682f4a9ef 100644
--- a/run.sh
+++ b/run.sh
@@ -4,7 +4,7 @@
 basedir=$( cd "$(dirname "$0")" ; pwd -P)
 
 # Activate environment that was created in the builed-env.sh file
-# source activate osgeo-env
+source activate osgeo-env
 
 # Create output dir
 # OUTPUTDIR="${PWD}/output"